Einstein Analytics dashboards integrated into Lightning Pages with filters, come with 'Modified' and '+X filters' buttons on top (see image below).
Is there any way to remove or disable them?
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You can uncheck Show Header on the Lightning Page, Wave Dashboard component. This removes the header bar which has the Filters component.
If your filter is set at the dashboard, rather than added on the Lightning Page, you can also Lock a global filter at design time. Locked can be set either through the Dashboard Designer if using the Filter panel or directly in the JSON.
its all because of the saved views coming into the play, so create a two permission sets one having this permission under settings "Enable Wave dashboard saved views" other not having this feature. assign the permission set which doesnt have "Enable Wave dashboard saved views" to the user so that he will not be able to edit the pre defined filters.
else you can just uncheck the "Enable Wave dashboard saved views" in the analytics-->settings.